Collart, F. 2021. Predicting the dynamics of range shifts under climate change: assumptions and applications to the European bryophyte flora. PhD thesis, University of Liège. (A. Guisan as Co-Director; Director: Dr. Alain Vanderpoorten). pdf
Ducotterd, C. 2020. Ecology of the European pond turtle (Emys orbicularis, L. 1758) in Switzerland. PhD thesis, University of Lausanne. (A. Guisan as Co-Director; Director: J.-F. Rubin)
Buri, A. 2019. Above- and belowground biogeography : Spatial modelling of a hidden system. PhD thesis, University of Lausanne. pdf
Phelps, L.N., 2019. Reconstructing land use and land cover dynamics of Holocene animal production on the African continent. PhD thesis, University of Lausanne.
Fernandes, R.F. 2018. Uncertainty, errors and virtual ecology: using artificial data to improve species distribution models. PhD thesis, University of Lausanne. pdf
Pinto-Figueroa, E. 2016. Fungal biogeography in the Western Swiss Alps. Linking high-throughput sequencing and spatial ecology to characterize the diversity, distribution patterns and environmental niche of soil fungi along environmental gradients. PhD thesis, University of Lausanne.
Breiner, F., 2015 Models, niches and traits: Towards improved Red List assessments. PhD thesis, University of Lausanne. pdf
Pradervand, J.-N., 2015 Assessing the use of very high resolution data to predict species distribution in a mountain environment. PhD thesis, University of Lausanne.
Petitpierre, B. 2014. Using environmental niche modelling to understand biological invasions in a changing world. PhD thesis, University of Lausanne. pdf
Pliscoff, P. 2013. Predicting the past, present and future of plant diversity in Chile: a habitat suitability modelling approach. PhD thesis, University of Lausanne
Ndiribe, C. 2013. The role of phylogeny in the spatial distributions and assembly of mountain plant communities. PhD thesis, University of Lausanne.
Dubuis, A. 2013. Predicting spatial patterns of plant biodiversity: from species to communities. PhD thesis, University of Lausanne. pdf
Pellissier, L. 2012. Species distributions and interactions in a changing world: from understanding to forecasting. PhD thesis, University of Lausanne.
Vicente, J.R. 2012. Modelling landscape invasion by alien plants under current and future conditions of climate and land use. PhD thesis, University of Porto & CIBIO (A. Guisan official co-superviser).
Maggini, R. 2011. Species distribution models for conservation-oriented studies in Switzerland: filling data and tool gaps. PhD thesis, University of Lausanne. pdf
Pio, D. 2010. Evolutionary history and its relevance in understanding and conserving southern African biodiversity. PhD thesis, University of Lausanne. pdf
Engler, R. 2009. Unfolding nature "in silico": overcoming practical and metodological limitations of species distribution models. PhD thesis, University of Lausanne. pdf
Broennimann, O. 2008. Niche, distribution and global changes: modeling insights into biogeography and conservation biology. PhD thesis, University of Lausanne. pdf
Randin, C. 2007. Providing more informative projections of climate change impact on plant distribution in a mountain environment. PhD thesis, University of Lausanne. pdf
Mathys, L. 2006. A discrete forest in a continuous landscape: investigating interactions between natural resource management and sustainable development. PhD thesis, University of Lausanne. pdf
Gehrig-Fasel, J. 2006. Treeline and climate change: analyzing and modelliing patterns and shifts in the Swiss Alps. PhD thesis, University of Lausanne.
Lütolf, M. 2006. Changing landscapes of Switzerland: assessing effects of historic and future land uses and land covers on the occurence of selected butterfly species. PhD thesis, University of Lausanne.
Rickebush, S. 2006. Modelling tree population dynamics at the alpine and boreal tree-line ecotones in response to climate and land-use change. PhD thesis, University of Lausanne. pdf
Dufour, A. 2006. Evaluation multi-échelle de la biodiversité végétale dans les paturages boisés du Jura. PhD thesis, University of Lausanne.
