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Liens UNIL

Faculty of Biology and Medicine

Department of Fundamental Microbiology

Publications

Publications | Masters and Phd thesis

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Publications

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2024 | 2023 | 2022 | 2021 | 2020 | 2019 | ...

2024

Fragmented micro-growth habitats present opportunities for alternative competitive outcomes.

Batsch M., Guex I., Todorov H., Heiman C.M., Vacheron J., Vorholt J.A., Keel C., van der Meer J.R., 2024/08/31. Nature communications, 15 (1) p. 7591. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_AEEA6BC007E1]

preview resource BIB_F7F937F6EE53.P001

Natural plant disease suppressiveness in soils extends to insect pest control.

Harmsen N., Vesga P., Glauser G., Klötzli F., Heiman C.M., Altenried A., Vacheron J., Muller D., Moënne-Loccoz Y., Steinger T. et al., 2024/07/16. Microbiome, 12 (1) p. 127. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_F7F937F6EE53]

preview resource BIB_F80B28E3BC45.P002

Entomopathogenic pseudomonads can share an insect host with entomopathogenic nematodes and their mutualistic bacteria.

Zwyssig M., Spescha A., Patt T., Belosevic A., Machado RAR, Regaiolo A., Keel C., Maurhofer M., 2024/01/08. The ISME journal, 18 (1). Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_F80B28E3BC45]

preview resource BIB_42B902B3C64C.P001

Expanding the Pseudomonas diversity of the wheat rhizosphere: four novel species antagonizing fungal phytopathogens and with plant-beneficial properties.

Poli N., Keel C.J., Garrido-Sanz D., 2024. Frontiers in microbiology, 15 p. 1440341. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_42B902B3C64C]

2023

From microbiome composition to functional engineering, one step at a time.

Burz S.D., Causevic S., Dal Co A., Dmitrijeva M., Engel P., Garrido-Sanz D., Greub G., Hapfelmeier S., Hardt W-D, Hatzimanikatis V. et al., 2023/12/20. Microbiology and molecular biology reviews, 87 (4) pp. e0006323. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_422DE1C48246]

preview resource BIB_82744722D0F1.P001

Molecular and evolutionary basis of O-antigenic polysaccharide-driven phage sensitivity in environmental pseudomonads.

Vacheron J., Heiman C.M., Garneau J.R., Kupferschmied P., de Jonge R., Garrido-Sanz D., Keel C., 2023/12/12. Microbiology spectrum, 11 (6) pp. e0204923. Peer-reviewed.

[URN][DOI][Pmid][serval:BIB_82744722D0F1]

preview resource BIB_EF63E1760D48.P001

Biological hydrogen cyanide emission globally impacts the physiology of both HCN-emitting and HCN-perceiving Pseudomonas.

Anand A., Falquet L., Abou-Mansour E., L'Haridon F., Keel C., Weisskopf L., 2023/10/31. mBio, 14 (5) pp. e0085723. Peer-reviewed.

[URN][DOI][Pmid][serval:BIB_EF63E1760D48]

preview resource BIB_46EF5F18A042.P001

Changes in structure and assembly of a species-rich soil natural community with contrasting nutrient availability upon establishment of a plant-beneficial Pseudomonas in the wheat rhizosphere.

Garrido-Sanz D., Čaušević S., Vacheron J., Heiman C.M., Sentchilo V., van der Meer J.R., Keel C., 2023/09/29. Microbiome, 11 (1) p. 214. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_46EF5F18A042]

preview resource BIB_7AA32FDA31E2.P001

Relation of pest insect-killing and soilborne pathogen-inhibition abilities to species diversification in environmental Pseudomonas protegens.

Garrido-Sanz D., Vesga P., Heiman C.M., Altenried A., Keel C., Vacheron J., 2023/09. The ISME journal, 17 (9) pp. 1369-1381. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_7AA32FDA31E2]

preview resource BIB_54B524FC3B63.P001

The conserved iol gene cluster in Pseudomonas is involved in rhizosphere competence

Sánchez-Gil Juan J., Poppeliers Sanne W.M., Vacheron Jordan, Zhang Hao, Odijk Bart, Keel Christoph, de Jonge Ronnie, 2023/08. Current Biology, 33 (15) pp. 3097-3110.e6.

[URN][DOI][WoS][Pmid][serval:BIB_54B524FC3B63]

preview resource BIB_CD75D9947DAA.P002

Evolutionary and ecological role of extracellular contractile injection systems: from threat to weapon.

Heiman C.M., Vacheron J., Keel C., 2023. Frontiers in microbiology, 14 p. 1264877. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_CD75D9947DAA]

2022

The secret life of plant-beneficial rhizosphere bacteria: insects as alternative hosts.

Pronk LJU, Bakker PAHM, Keel C., Maurhofer M., Flury P., 2022/08. Environmental microbiology, 24 (8) pp. 3273-3289. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_F462FE0DBD87]

preview resource BIB_B47F87DA7122.P001

Pivotal role of O-antigenic polysaccharide display in the sensitivity against phage tail-like particles in environmental Pseudomonas kin competition.

Heiman C.M., Maurhofer M., Calderon S., Dupasquier M., Marquis J., Keel C., Vacheron J., 2022/07. The ISME journal, 16 (7) pp. 1683-1693. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_B47F87DA7122]

2021

preview resource BIB_6B330AF7F996.P001

Phylogenetically closely related pseudomonads isolated from arthropods exhibit differential insect-killing abilities and genetic variations in insecticidal factors.

Vesga P., Augustiny E., Keel C., Maurhofer M., Vacheron J., 2021/09. Environmental microbiology, 23 (9) pp. 5378-5394. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_6B330AF7F996]

preview resource BIB_5263D5120A12.P001

Induction of Wheat Resistance to STB by the Endophytic Fungus serendipita Indica and pseudomonas Protegens.

Ashrafi J., Rahnama K., Babaeizad V., Ramezanpour S.S., Keel C., 2021/04. Iranian journal of biotechnology, 19 (2) pp. e2762. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_5263D5120A12]

Spatially Restricted Immune Responses Are Required for Maintaining Root Meristematic Activity upon Detection of Bacteria.

Emonet A., Zhou F., Vacheron J., Heiman C.M., Dénervaud Tendon V., Ma K.W., Schulze-Lefert P., Keel C., Geldner N., 2021/03/08. Current biology, 31 (5) pp. 1012-1028.e7. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_588DB4B995B9]

preview resource BIB_2C21215297A5.P001

Live cell dynamics of production, explosive release and killing activity of phage tail-like weapons for Pseudomonas kin exclusion.

Vacheron J., Heiman C.M., Keel C., 2021/01/19. Communications biology, 4 (1) p. 87. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_2C21215297A5]

2020

preview resource BIB_EF75F9C7092F.P001

Transcriptome plasticity underlying plant root colonization and insect invasion by Pseudomonas protegens.

Vesga P., Flury P., Vacheron J., Keel C., Croll D., Maurhofer M., 2020/11. The ISME journal, 14 (11) pp. 2766-2782. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_EF75F9C7092F]

preview resource BIB_C5C982992C01.P001

Draft Genome Sequence of Pseudomonas sp. Strain LD120, Isolated from the Marine Alga Saccharina latissima

Heiman Clara Margot, Wiese Jutta, Kupferschmied Peter, Maurhofer Monika, Keel Christoph, Vacheron Jordan, 2020/02/20. Microbiology Resource Announcements, 9 (8).

[URN][DOI][Pmid][serval:BIB_C5C982992C01]

2019

preview resource BIB_AD139EFD6DCC.P001

Updated Genome Sequence and Annotation for the Full Genome of Pseudomonas protegens CHA0.

Smits THM, Rezzonico F., Frasson D., Vesga P., Vacheron J., Blom J., Pothier J.F., Keel C., Maurhofer M., Sievers M., 2019/09/26. Microbiology resource announcements, 8 (39). Peer-reviewed.

[URN][DOI][Pmid][serval:BIB_AD139EFD6DCC]

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Phd thesis

Publications (6)

The role of viral particles in the interbacterial competitiveness of plant-beneficial Pseudomonas

Heiman Clara, 2024/02/05., Université de Lausanne, Faculté de biologie et médecine, Keel Christoph (dir.).

[URN][serval:BIB_525E48EA2D62]

SUSTAINING AND IMPROVING SOIL HEALTH WITH PLANT-BENEFICIAL BACTERIA

IMPERIALI Nicola, 2018., Université de Lausanne, Faculté de biologie et médecine, Keel Christoph (dir.).

[serval:BIB_EFCF6E9DC48D]

preview resource BIB_FB118BB07158.P001

Molecular basis and regulation of insect pathogenicity in plant-beneficial pseudomonads

Kupferschmied P., 2015/09., Université de Lausanne, Faculté de biologie et médecine, Keel C. (dir.).

[URN][serval:BIB_FB118BB07158]

Study of the regulation of antifungal activity in plant-associated pseudomas fluorescens

Rochat L., 2011. 235, Université de Lausanne, Faculté de biologie et médecine, Keel C. (dir.).

[serval:BIB_9B23E03DDB92]

Use of fluorescent proteins to monitor the regulation of antifungal activity in root-associated Pseudomonas fluorescens CHA0

Baehler E., 2005. 189, Université de Lausanne, Faculté de biologie et médecine, Keel C. (dir.).

[serval:BIB_43346]

Mechanisms of suppression of soil-borne plant diseases by Pseudomonas fluorescens under gnotobiotic conditions

Keel C., 1989., ETH, Zürich, Switzerland.

[serval:BIB_3179BBD2CDAF]

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