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Publications

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In Press

Metabolic outcomes in obese mice undergoing one-anastomosis gastric bypass (OAGB) with a long or a short biliopancreatic limb.

Lazaridis I.I., Bosch AJT, Keller L., Low AJY, Tamarelle J., Moser S.O., Winter D.V., Gómez C., Peterson C.J., Schneider R. et al. American journal of physiology. Endocrinology and metabolism. Peer-reviewed.

[DOI][Pmid][serval:BIB_CC38E2EC8DFD]

Small intestinal microbiota: from taxonomic composition to metabolism.

Yersin S., Vonaesch P. Trends in microbiology. Peer-reviewed.

[DOI][Pmid][serval:BIB_1EAF55E4ABF5]

2023

From microbiome composition to functional engineering, one step at a time.

Burz S.D., Causevic S., Dal Co A., Dmitrijeva M., Engel P., Garrido-Sanz D., Greub G., Hapfelmeier S., Hardt W-D, Hatzimanikatis V. et al., 2023/12/20. Microbiology and molecular biology reviews, 87 (4) pp. e0006323. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_422DE1C48246]

Gut microbiomes of agropastoral children from the Adadle region of Ethiopia reflect their unique dietary habits.

Yersin S., Garneau J.R., Schneeberger PHH, Osman K.A., Cercamondi C.I., Muhummed A.M., Tschopp R., Zinsstag J., Vonaesch P., 2023/12/01. Scientific reports, 13 (1) p. 21342. Peer-reviewed.

[DOI][Pmid][serval:BIB_8F5F34068447]

Whole-genome sequencing for One Health surveillance of antimicrobial resistance in conflict zones: a case study of Salmonella spp. and Campylobacter spp. in the West Bank, Palestine.

Abukhattab S., Hosch S., Abu-Rmeileh NME, Hasan S., Vonaesch P., Crump L., Hattendorf J., Daubenberger C., Zinsstag J., Schindler T., 2023/09/28. Applied and environmental microbiology, 89 (9) pp. e0065823. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_0AF8DA3709D9]

Factors Associated with Carriage of Enteropathogenic and Non-Enteropathogenic Viruses: A Reanalysis of Matched Case-Control Data from the AFRIBIOTA Site in Antananarivo, Madagascar.

Razanajatovo I.M., Andrianomiadana L., Habib A., Randrianarisoa M.M., Razafimanjato H., Rakotondrainipiana M., Andriantsalama P., Randriamparany R., Andriamandimby S.F., Vonaesch P. et al., 2023/08/02. Pathogens, 12 (8) p. 1009. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_BFF634D3CBDA]

Prevalence and associated risk factors of intestinal parasitic infections among children in pastoralist and agro-pastoralist communities in the Adadle woreda of the Somali Regional State of Ethiopia.

Lanker K.C., Muhummed A.M., Cissé G., Zinsstag J., Hattendorf J., Yusuf R.B., Hassen S.B., Tschopp R., Vonaesch P., 2023/07. PLoS neglected tropical diseases, 17 (7) pp. e0011448. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_301D1EFA3E37]

A MALDI-TOF MS library for rapid identification of human commensal gut bacteria from the class Clostridia.

Asare P.T., Lee C.H., Hürlimann V., Teo Y., Cuénod A., Akduman N., Gekeler C., Afrizal A., Corthesy M., Kohout C. et al., 2023. Frontiers in microbiology, 14 p. 1104707. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_3CB9A6F82FA0]

Corrigendum: A MALDI-TOF MS library for rapid identification of human commensal gut bacteria from the class Clostridia.

Asare P.T., Lee C.H., Hürlimann V., Teo Y., Cuénod A., Akduman N., Gekeler C., Afrizal A., Corthesy M., Kohout C. et al., 2023. Frontiers in microbiology, 14 p. 1208177. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_D28F1D58D895]

Dynamics and consequences of nutrition-related microbial dysbiosis in early life: study protocol of the VITERBI GUT project.

Tamarelle J., Creze M.M., Savathdy V., Phonekeo S., Wallenborn J., Siengsounthone L., Fink G., Odermatt P., Kounnavong S., Sayasone S. et al., 2023. Frontiers in nutrition, 10 p. 1111478. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_87EAEC78D932]

The eukaryome of African children is influenced by geographic location, gut biogeography, and nutritional status.

Vonaesch P., Billy V., Mann A.E., Morien E., Habib A., Collard J.M., Dédé M., Kapel N., Sansonetti P.J., Parfrey L.W. et al., 2023. microLife, 4 pp. uqad033. Peer-reviewed.

[DOI][Pmid][serval:BIB_95A010428D60]

2022

Could a Shigella vaccine impact long-term health outcomes?: Summary report of an expert meeting to inform a Shigella vaccine public health value proposition, March 24 and 29, 2021.

Bagamian K.H., Puett C., Anderson J.D., Muhib F., Pecenka C., Behrman J., Breiman R.F., Edoka I., Horton S., Kang G. et al., 2022/12. Vaccine, 12 p. 100218. Peer-reviewed.

[URN][DOI][Pmid][serval:BIB_7A7FD9E71BF7]

Roux-en-Y gastric bypass with a long versus a short biliopancreatic limb improves weight loss and glycemic control in obese mice

Schneider Romano, Kraljević Marko, Peterli Ralph, Rohm Theresa V., Bosch Angela J.T., Low Andy J.Y., Keller Lena, AlAsfoor Shefaa, Häfliger Simon, Yilmaz Bahtiyar et al., 2022/11. Surgery for Obesity and Related Diseases, 18 (11) pp. 1286-1297. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_291356ED91C1]

Stunted children display ectopic small intestinal colonization by oral bacteria, which cause lipid malabsorption in experimental models.

Vonaesch P., Araújo J.R., Gody J.C., Mbecko J.R., Sanke H., Andrianonimiadana L., Naharimanananirina T., Ningatoloum S.N., Vondo S.S., Gondje P.B. et al., 2022/10/11. Proceedings of the National Academy of Sciences of the United States of America, 119 (41) pp. e2209589119. Peer-reviewed.

[URN][DOI][Pmid][serval:BIB_3AD20D6368D6]

Putative Biomarkers of Environmental Enteric Disease Fail to Correlate in a Cross-Sectional Study in Two Study Sites in Sub-Saharan Africa.

Vonaesch P., Winkel M., Kapel N., Nestoret A., Barbot-Trystram L., Pontoizeau C., Barouki R., Rakotondrainipiana M., Kandou K., Andriamanantena Z. et al., 2022/08/12. Nutrients, 14 (16) p. 3312. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_711D1A977AA9]

Factors associated with anaemia among preschool- age children in underprivileged neighbourhoods in Antananarivo, Madagascar.

Randrianarisoa M.M., Rakotondrainipiana M., Randriamparany R., Andriantsalama P.V., Randrianarijaona A., Habib A., Robinson A., Raharimalala L., Hunald F.A., Etienne A. et al., 2022/07/09. BMC public health, 22 (1) p. 1320. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_26C7EE805CB3]

High prevalence of small intestine bacteria overgrowth and asymptomatic carriage of enteric pathogens in stunted children in Antananarivo, Madagascar.

Collard J.M., Andrianonimiadana L., Habib A., Rakotondrainipiana M., Andriantsalama P., Randriamparany R., Rabenandrasana MAN, Weill F.X., Sauvonnet N., Randremanana R.V. et al., 2022/05. PLoS neglected tropical diseases, 16 (5) pp. e0009849. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_1640BF2DE312]

Systematic Review and Meta-Analysis of Integrated Studies on Salmonella and Campylobacter Prevalence, Serovar, and Phenotyping and Genetic of Antimicrobial Resistance in the Middle East-A One Health Perspective.

Abukhattab S., Taweel H., Awad A., Crump L., Vonaesch P., Zinsstag J., Hattendorf J., Abu-Rmeileh NME, 2022/04/19. Antibiotics, 11 (5) p. 536. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_77D20AA39578]

Changes in Systemic Regulatory T Cells, Effector T Cells, and Monocyte Populations Associated With Early-Life Stunting.

Andriamanantena Z., Randrianarisaona F., Rakotondrainipiana M., Andriantsalama P., Randriamparany R., Randremanana R., Randrianirina F., Novault S., Duffy D., Huetz F. et al., 2022. Frontiers in immunology, 13 p. 864084. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_7E9A928B7532]

Intestinal microbiota research from a global perspective.

Wallenborn J.T., Vonaesch P., 2022. Gastroenterology report, 10 pp. goac010. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_2FC2964D3FEC]